Description:

Retrieve information on Open Reading Frames that are represented by more than a given number of ESTs from EST Libraries that are/not randomly sequenced and contain more than a given number of ESTs

Runtime:

Can take about 2-3 minutes to complete.

Input:

Details

Genome	The genome of interest
Number of ESTs from the library	Minimum number of ESTs that represent the Open Reading Frame from the EST Library
EST Library randomly sequenced	Chose between true/false for libraries that are/not randomly sequenced
EST Library with number of ESTs larger than	Minimum number of ESTs in the library

Examples

Genome	Number of ESTs from the library	EST Library randomly sequenced	EST Library with number of ESTs larger than
Gibberella zeae	30	true	300
Magnaporthe grisea	10	false	500

Output:

Description

General information on the Open Reading Frame

Details

Open Reading Frame ID	Identifier of the Open Reading Frame
Genome	Genome which the Open Reading Frame belongs to
# ESTs	Number of ESTs that represent this Open Reading Frame
# EST Unisequences	Number of EST Unisequences that represent this Open Reading Frame
Locus Tag	The Locus Tag of this Open Reading Frame
Protein ID	Identifier of the protein product of this Open Reading Frame
Protein Description	The description of the protein